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Third Edition of SIG workshop

07h30-08h00

Registration

08h00-9h45

1- NGS principles from sample collection to variant interpretation, genotyping vs WES vs WGS, overview of NGS platforms

2- Exome data metrics, pipelines and principles of filtering: from fastq to BAM to VCF files.

3- BAM and VCF visualization using Integrated Genome Viewer (IGV)

Belmouden A., Sadki K., Idaghdour Y., Manikandan V. 

09h45-10h00

Coffee break

 

10h00-11h15

4- Variant annotation and guidelines for filtering and prioritization using online resources and specialized program (Ingenuity Variant Analysis)

5- Discuss the level of evidence needed to confidently publish a new disease gene or variant.

Belmouden A., Sadki K., Idaghdour Y., Manikandan V. 

11h15-12h30

6-Ingenuity Pathway Analysis

Dubus E & Chettouh  (Qiagen company)

First international congress of SM2GH & Third Edition of SIG

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10h00-17h00 Registration 
Opening ceremonie &  Inaugural  Conferences (Officials and keynote speakers )
13h30-14h15 Opening ceremonie
14h15-14h55 Integrative Genomic Approaches to Study Complex Disease keynote speaker : Idaghdour  Youssef /UAE/USA 
14h55-15h25 Immunogenetics and human pathology : Challenges and promises keynote speaker : El Aouad Rajae,  Hassan II Academy of Sciences and Technology/ Morocco
15h25-16h00 Break & Refreshments @  Poster session
Session 1 : Genetic of rare diseases (Moderators :) 
16h00-16h30 The genetics of mitochondrial inherited diseases Guy Lenaers / France 
16h30-16h50 Mucopolysaccharidosis type IHS: a retrospective case series analysis of 16 Moroccan patients Abilkassem Rachid  /Morocco 
16h50-17h10 The Genetics of hereditary Deafness : State of the art in Morocco Barakat Abdehamid /Morocco 
17h10-17h30 Clinical and molecular genetic aspects of Leber's Congenital amaurosis : The first Moroccan series Aboussair Nissrine /Morocco
17h30-18h00 Oral communications Students

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Session 2 : Cancer Genomics and  Gene therapy (Moderators :  )
08h30-09h10 CART: driving immunotherapy to patients through an academic approach keynote speaker: Juan Manel / Spain
Part1: Cancer Genomic
09h10-09h40 Cellular and Molecular Mechanisms Involved in the Action of Adrenomedullin in Tumor Growth Ouafik L'houcine/France 
09h40-10h10 Epigenomics of trauma and post-traumatic stress disorder: case study Leon Mutesa/ Rwanda 
10h10-10h40 Break & Refreshments @  Poster session
Part2: Genetics Immunotherapy
10h40-11h10 Epigenetic regulation of immune microenvironment in acute leukemia Makram Merimi /Morocco 
10h40-11h05 Gene transfer system optimization to improve cancer immunotherapy with  CART-T cells Francisco Martin/Spain
11h05-11h35 Generation of "off-the shelf " clinical-grade inducible αCD19-CAR T cells ex-/- for the treatment of B cell malignancies Karim Benabdel/Spain 
11h35-12h10 Oral communications Students
12h10-14h00 Lunch
Part3: Personalised medicine  & Gene therapy  
14h00-14h30 Oncology in Morocco Errihani  Hassan /Morocco  
14h30-15h00 Oncogenic driver mutation in cancers  Laraqui Abdelilah /Morocco 
15h30-16h00 Pharmacogenetics and pharmacogenomics: a bridge to an individualized therapy  Izaabel EL Hassan/Morocco 
16h00-16h30 Break & Refreshments @  Poster session
16h30-17h30 Public Program: Plenary conference :  Genetic medicine in Africa: problem, promise, prospect. keynote speaker: Ambroise Wonkam, President of  AfSHG /South of Africa

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Session 3 : Genetics of Host-Pathogen (Moderators :     )
08h30-09h10 Host-pathogen co-evolution: how do we assess pathognecity? keynote speaker: Scott Williams /USA 
09h10-09h40 Genome-wide mutational events and selective forces underpinning the successful spread of particular Mycobacterium tuberculosis lineage 4 genotypes Helmi Mardassi/Tunisia 
09h40-10h10 Single-cell RNA-Seq and Transcriptional Profiling to Identify Genes and Immune pathways associated herpes simplex protection BenMohamed Lbachir/ USA 
10h10-10h40 Break & Refreshments @  Poster session
10h40-11h05 Antibiotic resistance genes spread: a growing threat for care health Belmouden Ahmed/Morocco  
11h05-11h30 Neglected Tropical Diseases Pathogen and Human Genetic interaction in the Genomic Era: opportunities for (Sub Saharan)  Issiaka Soulama/ Burkina Faso 
11h30-12h00 Oral communications  Students
12h00-14h00 Lunch
Session 4 : Genomic of stem cells (Moderators :    )
14h00-14h40 Hematopoietic stem-cell as a tool for gene and immune therapies keynote speaker: Philippe Lewalle/ Belgium  
14h40-15h10 Immunommodulation of inflammation: a key therapeutic approach to treat acquired liver diseases via liver derived stem cells  Najimi Mustapha/ Belgium 
15h10-15h40 The Role of Mesenchymal Stem/Stromal Cells in Immunity and Disease Najar Mehdi / Tunisia/Belgium
15h10-15h40 Break & Refreshments @  Poster session
15h40-16h10 Oral communications Students
16h50-17h30 Panel Discussion  Wonkam A, Belmouden A, Idaghdour Y , Najimi M, Ouafik L, BenMohamed L, Sadki k 
17h30-17h45 Best poster/oral prize & closing remarques
19h00 Gala Diner


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